STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14851.1Multi-sensor hybrid histidine kinase. (904 aa)    
Predicted Functional Partners:
AHC14853.1
Response regulator.
 
 
 0.953
AHC14120.1
Hypothetical protein.
 
 
 0.911
AHC15332.1
Hypothetical protein.
 
 
0.908
AHC13471.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 0.892
AHC14775.1
Two-component response regulator SA14-24.
 
 0.878
AHC14163.1
GGDEF domain protein.
 
 0.876
AHC15333.1
Hypothetical protein.
 
 
 0.869
AHC14333.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 0.852
AHC13900.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 
 0.831
AHC16392.1
Two-component response regulator.
 
   0.829
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.