Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC14894.1Transcriptional regulator, MarR family. (152 aa)    
Predicted Functional Partners:
AHC14895.1
Hypothetical protein.
 
     0.880
AHC14176.1
D-alanyl-D-alanine carboxypeptidase.
  
     0.636
AHC16280.1
Hypothetical protein.
  
     0.588
AHC16232.1
Hypothetical protein.
 
     0.581
AHC16769.1
ABC transporter, permease protein, putative.
 
   
 0.536
AHC14893.1
Putative oxidoreductase FAD/NAD(P)-binding component.
     
 0.535
AHC14219.1
Putative CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
 
  
 0.480
AHC16238.1
Hypothetical protein.
  
     0.457
AHC15943.1
Transcriptional regulator.
  
    0.440
AHC15928.1
Phytol kinase.
  
     0.400
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.