STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14898.1Response regulator. (332 aa)    
Predicted Functional Partners:
AHC16565.1
Hypothetical protein.
 
 0.964
AHC15964.1
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor.
  
 0.958
AHC16037.1
Response regulator.
 
     0.955
AHC15683.1
Hypothetical protein.
  
 0.953
AHC15104.1
Hypothetical protein.
  
 0.949
AHC14163.1
GGDEF domain protein.
  
0.941
AHC16043.1
Hypothetical protein.
 
 0.913
AHC15332.1
Hypothetical protein.
 
 0.862
AHC15106.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 0.854
AHC16213.1
Hypothetical protein.
  
 0.811
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.