STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14899.1Phenylacetic acid degradation-related protein. (141 aa)    
Predicted Functional Partners:
AHC16404.1
1,4-dihydroxy-2-naphthoate polyprenyltransferase.
 
  
 0.952
AHC13758.1
Hydrolase (HAD superfamily).
      0.902
AHC14898.1
Response regulator.
       0.741
AHC13850.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.616
AHC13849.1
Methylglutaconyl-CoA hydratase.
 
 
 0.598
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.566
AHC15730.1
Multifunctional fatty acid oxidation complex subunit alpha.
  
 
 0.563
AHC14897.1
Hypothetical protein.
       0.550
AHC13845.1
Malonyl CoA-acyl carrier protein transacylase.
  
  
 0.523
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
  
 0.426
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.