STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC14976.1HesA/MoeB/ThiF family protein. (269 aa)    
Predicted Functional Partners:
AHC14977.1
Putative deoxyribonuclease YcfH.
 
     0.839
AHC14979.1
Hypothetical protein.
       0.782
AHC14978.1
Protein secretion chaperonin CsaA.
       0.773
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
    
 0.726
AHC14975.1
5'-nucleotidase YjjG.
  
    0.656
AHC13752.1
Ribosomal large subunit pseudouridine synthase D.
 
    0.430
AHC13572.1
Peptidyl-prolyl cis-trans isomerase.
 
    0.423
AHC16064.1
Sulfur acceptor protein SufE for iron-sulfur cluster assembly.
   
 
 0.411
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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