Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC14986.1HflK protein; HflC and HflK could encode or regulate a protease. (331 aa)    
Predicted Functional Partners:
AHC14985.1
HflC protein; HflC and HflK could regulate a protease.
   
 0.992
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.842
AHC15492.1
Putative zinc protease pqqL; Belongs to the peptidase M16 family.
  
 0.659
AHC14088.1
Endonuclease.
   
 0.584
AHC16821.1
Putative activity regulator of membrane protease YbbK.
 
 
 0.524
AHC14294.1
Translation elongation factor Tu.
   
 
 0.509
AHC15580.1
Putative membrane protease.
  
     0.480
yidC
Inner membrane protein translocase component YidC, long form; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.
  
 
 0.462
AHC16287.1
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
   
    0.459
AHC14987.1
Dienelactone hydrolase family protein.
  
    0.442
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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