STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15054.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (497 aa)    
Predicted Functional Partners:
AHC14807.1
Multimodular transpeptidase-transglycosylase.
     
 0.920
AHC15017.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.919
AHC15053.1
Substrate-specific component BioY of biotin ECF transporter.
       0.576
AHC15051.1
Hypothetical protein.
       0.557
AHC15052.1
ATPase component of general energizing module of ECF transporter.
       0.557
AHC13726.1
Hypothetical protein.
 
  
 0.510
AHC15155.1
Penicillin-binding protein 2 (PBP-2).
 
  
 0.510
AHC16834.1
Hypothetical protein co-occurring with RecR; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
 
    0.506
AHC14562.1
Cell division protein FtsW; Belongs to the SEDS family.
 
   
 0.499
AHC14613.1
Cell division protein FtsI (Peptidoglycan synthetase).
  
 0.495
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.