STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15055.1Putative dihydropyrimidine dehydrogenase [NADP+], similar to dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate. (324 aa)    
Predicted Functional Partners:
pyrE
Orotidine 5'-phosphate decarboxylase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP); Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily.
  
 0.998
AHC15623.1
Dihydroorotate dehydrogenase electron transfer subunit.
 
 0.991
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
  
 
 0.974
AHC14805.1
Aspartate carbamoyltransferase/ Aspartate carbamoyltransferase regulatory chain (PyrI).
  
  
 0.965
pyrD
Dihydroorotate dehydrogenase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
  
  
 
0.918
AHC16332.1
Putative dihydropyrimidine dehydrogenase [NADP+], similar to dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate.
  
  
 
0.909
AHC16350.1
Oxidoreductase, NAD-binding protein.
  
 
 0.903
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
 
   
 0.859
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
 
  
 0.816
pheT
Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.812
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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