STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15059.1Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2. (165 aa)    
Predicted Functional Partners:
AHC15058.1
Cysteine desulfurase, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.991
AHC14281.1
Iron-sulfur cluster assembly ATPase protein SufC.
 
  
 0.962
AHC15816.1
Cysteine desulfurase.
  
 
 0.956
AHC14282.1
Iron-sulfur cluster assembly protein SufB.
 
  
 0.943
AHC14283.1
Iron-sulfur cluster assembly protein SufD.
 
  
 0.927
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.912
AHC14280.1
PaaD-like protein (DUF59) involved in Fe-S cluster assembly.
 
    0.853
AHC15327.1
Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
   
 
 0.748
AHC15619.1
Putative transcriptional regulator of cysteine synthase, Rrf2 family.
  
  
 0.675
AHC16261.1
Iron-sulfur cluster regulator IscR.
  
  
 0.675
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.