STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15100.1Chemotaxis protein CheX. (155 aa)    
Predicted Functional Partners:
AHC15099.1
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
  
 
 0.920
AHC15278.1
Chemotaxis protein CheX.
  
  
 
0.920
AHC14968.1
Hypothetical protein.
     
  0.900
AHC15101.1
Signal transduction histidine kinase CheA.
   
 
 0.822
AHC15538.1
Response regulator.
   
 0.816
AHC15882.1
Signal transduction histidine kinase CheA.
   
 0.816
AHC15888.1
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
   
 0.816
AHC14606.1
Hypothetical protein.
  
     0.753
AHC16368.1
Hypothetical protein.
  
     0.744
AHC13499.1
Hypothetical protein.
  
     0.736
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.