STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15281.1Hypothetical protein. (338 aa)    
Predicted Functional Partners:
AHC15279.1
Positive regulator of CheA protein activity (CheW).
     
 0.573
AHC15283.1
N-acetylmuramoyl-L-alanine amidase.
     
 0.566
AHC15284.1
Hypothetical protein.
       0.564
AHC15282.1
Hypothetical protein.
       0.562
AHC15280.1
Signal transduction histidine kinase CheA.
     
 0.545
AHC15278.1
Chemotaxis protein CheX.
       0.489
AHC15285.1
Cytidylyltransferase domain protein.
       0.420
AHC15286.1
Spore coat polysaccharide biosynthesis protein F (spsF).
       0.420
AHC15287.1
Hypothetical protein.
       0.420
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.