STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15332.1Hypothetical protein. (814 aa)    
Predicted Functional Partners:
AHC15106.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
 
 0.995
AHC15910.1
Chemotaxis protein methyltransferase CheR.
 
 
 0.995
AHC14163.1
GGDEF domain protein.
 
0.994
AHC14948.1
Two-component hybrid sensor and regulator.
 
 0.994
AHC16050.1
Hypothetical protein.
 
 
0.993
AHC16393.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
0.992
AHC14706.1
Hypothetical protein.
 
 
0.991
AHC15617.1
Response regulatory protein.
 
0.991
AHC14120.1
Hypothetical protein.
 
 0.989
AHC14969.1
Ammonium transporter.
 
 
 0.989
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.