STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15369.1Hypothetical protein. (89 aa)    
Predicted Functional Partners:
AHC15368.1
Na(+) H(+) antiporter subunit E.
 
 
 0.997
AHC15370.1
Na(+) H(+) antiporter subunit G.
 
 
 0.997
AHC15373.1
Putative Na(+) H(+) antiporter subunit C.
 
 
 0.997
AHC15374.1
Hydrogenase-4 component B/ Formate hydrogenlyase subunit 3.
 
 
 0.996
AHC15372.1
Putative Na(+) H(+) antiporter subunit B.
 
 
 0.992
AHC15371.1
Membrane bound hydrogenase, MbhD subunit.
 
 
 
 0.976
AHC15366.1
Hypothetical protein.
 
     0.877
AHC15367.1
PTS system, fructose-specific IIABC component.
       0.802
rnfB
Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
   0.640
AHC15375.1
Hypothetical protein.
       0.442
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.