Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15391.1BioD-like N-terminal domain of phosphotransacetylase. (385 aa)    
Predicted Functional Partners:
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.938
AHC13522.1
Hypothetical protein.
 
     0.644
AHC13831.1
Permease.
  
     0.499
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.457
AHC15390.1
7,8 dihydropteroate synthase (methanopterin).
       0.449
AHC15501.1
Thioredoxin.
  
     0.424
AHC14442.1
Carbamate kinase; Belongs to the carbamate kinase family.
   
  
 0.422
AHC15829.1
ABC transporter ATP-binding protein.
   
    0.421
AHC16278.1
Oligopeptide transport ATP-binding protein OppF.
   
    0.421
AHC13721.1
Shikimate 5-dehydrogenase I alpha.
 
   
 0.419
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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