Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC15421.1Transport ATP-binding protein CydC. (571 aa)    
Predicted Functional Partners:
AHC15420.1
Hypothetical protein.
 
 
0.997
AHC13797.1
ABC transporter ATP-binding protein.
 
   
0.928
phnC-2
Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
    
0.820
AHC16760.1
Putative amino-acid ABC transporter ATP-binding protein y4tH.
 
    
0.763
AHC14474.1
ABC transporter, ATP-binding protein.
 
    0.684
pstB
Phosphate transport ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
      0.666
AHC15977.1
Glutamate transport ATP-binding protein.
 
    
0.645
AHC15418.1
Hypothetical protein.
       0.533
AHC15419.1
Hypothetical protein.
       0.533
AHC14131.1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
     
0.521
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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