STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15435.1Hypothetical protein. (268 aa)    
Predicted Functional Partners:
AHC15434.1
Mobile element protein.
    0.970
AHC16453.1
Hypothetical protein.
 
   
 0.610
AHC14576.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
   0.605
AHC15433.1
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family.
       0.554
AHC15498.1
Hypothetical protein.
  
    0.549
AHC14404.1
Hypothetical protein.
 
     0.548
AHC13872.1
Hypothetical protein.
  
     0.418
AHC16605.1
Hypothetical protein.
   
 
 0.412
AHC16454.1
Hypothetical protein.
 
   
 0.404
AHC15643.1
Hypothetical protein.
 
 
 
 0.400
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.