Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC15498.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
AHC14219.1
Putative CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
 0.825
AHC13572.1
Peptidyl-prolyl cis-trans isomerase.
  
 
 0.812
AHC16453.1
Hypothetical protein.
 
     0.783
AHC13823.1
Hypothetical protein.
 
  
 0.775
AHC14404.1
Hypothetical protein.
 
    0.766
AHC14737.1
Pheromone cAD1 precursor lipoprotein Cad.
  
     0.764
AHC14350.1
Hypothetical protein.
  
     0.755
AHC16454.1
Hypothetical protein.
 
     0.755
AHC15802.1
Thioredoxin reductase.
 
 
 0.744
AHC15056.1
Manganese superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.741
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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