STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15533.1Amylopullulanase. (663 aa)    
Predicted Functional Partners:
AHC13564.1
Putative sucrose permease, MFS family, FucP subfamily.
  
     0.661
AHC16454.1
Hypothetical protein.
 
   0.611
AHC15069.1
Hypothetical protein.
 
    0.607
AHC15531.1
Hypothetical protein.
       0.603
AHC15532.1
Hypothetical protein.
       0.603
AHC15973.1
Hypothetical protein.
 
    0.587
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
   
   0.549
AHC13534.1
Adenylate cyclase.
  
 
   0.534
AHC16475.1
Cell division protein FtsX.
 
 
   0.531
AHC15874.1
Hypothetical protein.
 
 
   0.530
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.