Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15564.1Membrane-bound lytic murein transglycosylase D precursor. (440 aa)    
Predicted Functional Partners:
AHC15565.1
OmpA family protein.
   
 
 0.861
AHC15563.1
Hypothetical protein.
     
 0.826
AHC14815.1
Flagellar basal-body rod protein FlgF.
  
 
 0.770
AHC14816.1
Flagellar basal-body rod protein FlgG.
  
 
 0.770
AHC15562.1
Hypothetical protein.
 
    0.692
AHC16050.1
Hypothetical protein.
 
  
 0.612
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
   
 0.604
AHC15155.1
Penicillin-binding protein 2 (PBP-2).
 
 
 0.604
AHC16783.1
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
 
  
 0.599
AHC15561.1
Ferritin; Iron-storage protein.
       0.597
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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