Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15580.1Putative membrane protease. (408 aa)    
Predicted Functional Partners:
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.795
AHC15581.1
ABC transporter, ATP-binding protein.
       0.783
AHC15582.1
ABC transporter, permease protein.
       0.773
AHC15583.1
ABC-type transport system, involved in lipoprotein release, permease component.
       0.762
AHC15492.1
Putative zinc protease pqqL; Belongs to the peptidase M16 family.
  
 0.659
AHC16821.1
Putative activity regulator of membrane protease YbbK.
 
 
 0.641
AHC15579.1
Transcriptional regulator, GntR family.
 
    0.589
AHC14088.1
Endonuclease.
   
 0.584
AHC15584.1
Outer membrane lipoprotein-sorting protein.
  
    0.530
AHC14294.1
Translation elongation factor Tu.
   
 
 0.509
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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