Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15583.1ABC-type transport system, involved in lipoprotein release, permease component. (408 aa)    
Predicted Functional Partners:
AHC15581.1
ABC transporter, ATP-binding protein.
 
 
 0.978
AHC13753.1
ABC transporter, ATP-binding protein.
 
 
 0.913
AHC14474.1
ABC transporter, ATP-binding protein.
 
 
 0.906
AHC15584.1
Outer membrane lipoprotein-sorting protein.
 
     0.876
AHC15582.1
ABC transporter, permease protein.
 
    
0.830
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 
 0.792
AHC14476.1
ABC transporter permease protein.
 
  
 0.763
AHC13756.1
Hypothetical protein.
 
 
 
 0.762
AHC15580.1
Putative membrane protease.
       0.762
AHC16473.1
Hypothetical protein.
 
 
 
 0.717
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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