Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AHC15725.1HD domain protein. (284 aa)    
Predicted Functional Partners:
AHC15724.1
Agmatinase; Belongs to the arginase family.
       0.773
AHC15722.1
Carboxynorspermidine dehydrogenase, putative.
       0.718
AHC15723.1
Carboxynorspermidine decarboxylase, putative.
       0.718
AHC15721.1
Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.
 
     0.679
AHC14816.1
Flagellar basal-body rod protein FlgG.
 
    0.535
AHC14915.1
Hypothetical protein.
 
     0.527
AHC14591.1
Flagellar motor rotation protein MotA.
 
     0.509
AHC14605.1
RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
 
     0.472
AHC15720.1
Hypothetical protein.
       0.459
AHC15964.1
Diguanylate cyclase (GGDEF domain) with PAS/PAC sensor.
 
    0.458
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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