Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15735.1Putative oxidoreductase. (369 aa)    
Predicted Functional Partners:
AHC15734.1
Chromosome (plasmid) partitioning protein ParA.
       0.773
rnhA
Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
    
 0.734
AHC15732.1
Alcohol dehydrogenase.
  
 
 0.570
AHC14784.1
Galactokinase; Belongs to the GHMP kinase family.
 
 
 0.533
AHC15737.1
D-xylose transport ATP-binding protein XylG.
  
  
 0.532
AHC15952.1
Galactokinase; Belongs to the GHMP kinase family.
 
 
 0.530
AHC15736.1
L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
     
 0.490
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
   
   0.479
AHC15796.1
Hypothetical protein.
  
 
 0.460
AHC14466.1
Putative aminotransferase, DegT family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.417
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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