Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15736.1L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (400 aa)    
Predicted Functional Partners:
AHC15737.1
D-xylose transport ATP-binding protein XylG.
 
 0.994
AHC15739.1
Xylose ABC transporter, periplasmic xylose-binding protein XylF.
 
 0.988
AHC15740.1
Xylose ABC transporter, periplasmic xylose-binding protein XylF.
 
 0.987
AHC14907.1
Ribose ABC transport system, periplasmic ribose-binding protein RbsB.
  
 0.942
AHC14906.1
Putative ribose/galactose/methyl galactoside import ATP-binding protein 1.
  
 0.855
AHC14488.1
Xylose-responsive transcription regulator, ROK family.
 
     0.629
AHC13935.1
Xylose-responsive transcription regulator, ROK family.
 
     0.608
AHC15742.1
Two-component response regulator.
 
     0.587
AHC15744.1
Autolysin sensor kinase.
 
   
 0.550
AHC16433.1
Putative ROK-family transcriptional regulator.
 
     0.533
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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