Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15742.1Two-component response regulator. (539 aa)    
Predicted Functional Partners:
AHC15744.1
Autolysin sensor kinase.
 
  
 0.887
AHC15740.1
Xylose ABC transporter, periplasmic xylose-binding protein XylF.
 
     0.806
AHC14249.1
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY.
  
     0.700
AHC15739.1
Xylose ABC transporter, periplasmic xylose-binding protein XylF.
 
     0.693
AHC14969.1
Ammonium transporter.
  
 
 0.610
AHC14492.1
Response regulator.
  
     0.594
AHC14594.1
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 
 0.591
AHC16097.1
Flagellar motor switch protein FliM.
  
 
 0.591
AHC15736.1
L-arabinose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.587
AHC14775.1
Two-component response regulator SA14-24.
  
   
 0.585
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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