Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Score
rlmNRibosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (347 aa)    
Predicted Functional Partners:
AHC15757.1
Hypothetical protein.
  
  
 0.807
AHC14664.1
tRNA and rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
 0.785
AHC16423.1
Putative radical SAM family enzyme.
 
   
 0.716
AHC15970.1
MiaB family protein, possibly involved in tRNA or rRNA modification.
 
  
 0.711
AHC15969.1
tRNA-i(6)A37 methylthiotransferase.
 
  
 0.709
AHC14035.1
Putative radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent.
 
   
 0.700
nusB
Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
  
 0.629
AHC15268.1
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
 
     0.599
AHC15758.1
Hypothetical protein.
       0.581
AHC15755.1
Ferredoxin--NADP(+) reductase.
       0.550
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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