STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15776.1Hypothetical protein. (581 aa)    
Predicted Functional Partners:
AHC15334.1
Phosphoglucomutase (femD).
 
 0.799
AHC16829.1
Trehalase.
  
 
 0.777
AHC13646.1
Hypothetical protein.
  
    0.776
AHC13590.1
Hypothetical protein.
  
     0.774
AHC14753.1
Hypothetical protein.
  
     0.774
AHC13698.1
TPR domain protein, putative component of TonB system.
  
     0.772
AHC15151.1
TPR domain protein.
  
     0.770
AHC15297.1
Hypothetical protein.
  
     0.770
AHC15718.1
Hypothetical protein.
  
     0.770
AHC13726.1
Hypothetical protein.
  
     0.769
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.