Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AHC15783.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (56 aa)    
Predicted Functional Partners:
AHC13718.1
Periplasmic [Fe] hydrogenase large subunit.
   
 
 0.840
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.761
AHC15328.1
2,4-dienoyl-CoA reductase [NADPH].
   
 
 0.710
AHC16225.1
Succinate dehydrogenase flavoprotein subunit.
  
 
 0.676
AHC13714.1
NAD-reducing hydrogenase subunit HoxE.
   
 
 0.641
AHC13974.1
Hypothetical protein.
   
 
 0.641
AHC13977.1
Hypothetical protein.
   
 
 0.641
AHC16146.1
2-oxoglutarate oxidoreductase, alpha subunit.
  
 
 0.640
AHC14829.1
Glutamate synthase [NADPH] small chain.
   
 
 0.637
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 
 0.606
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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