Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15810.1Trk system potassium uptake protein TrkA. (232 aa)    
Predicted Functional Partners:
AHC15809.1
Potassium uptake protein, integral membrane component, KtrB.
 
 
 0.970
AHC16763.1
Potassium uptake protein TrkH.
  
 
 0.709
AHC15811.1
Hypothetical protein.
       0.635
AHC14815.1
Flagellar basal-body rod protein FlgF.
    
   0.610
pfp
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, beta subunit; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.
     
 0.468
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.461
AHC14664.1
tRNA and rRNA cytosine-C5-methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
    0.454
AHC15812.1
Manganese ABC transporter, ATP-binding protein SitB.
  
  
 0.416
AHC15813.1
Manganese ABC transporter, inner membrane permease protein SitD.
  
    0.400
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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