Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AHC15829.1ABC transporter ATP-binding protein. (305 aa)    
Predicted Functional Partners:
AHC15827.1
Dipeptide transport system permease protein DppC.
 
 0.996
AHC14485.1
(GlcNAc)2 ABC transporter, permease component 2.
 
 0.992
AHC16399.1
Oligopeptide transport system permease protein OppC.
 
 0.992
AHC15831.1
Dipeptide transport system permease protein DppB.
 
 0.973
AHC15828.1
Dipeptide-binding ABC transporter, periplasmic substrate-binding component.
 
 
 0.951
AHC16400.1
Oligopeptide transport system permease protein OppB.
 
 
 0.932
AHC16276.1
Hypothetical protein.
 
 
 0.931
AHC14129.1
Oligopeptide transport system permease protein OppB.
 
 0.927
AHC14484.1
(GlcNAc)2 ABC transporter, permease component 1.
 
 
 0.921
AHC13753.1
ABC transporter, ATP-binding protein.
 
   
0.916
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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