Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15918.1ABC transporter, ATP-binding protein. (282 aa)    
Predicted Functional Partners:
AHC15916.1
Transcriptional regulator, GntR family.
 
  
 0.956
AHC15917.1
Hypothetical protein.
       0.773
AHC15579.1
Transcriptional regulator, GntR family.
 
  
 0.708
AHC15004.1
Gliding motility protein GldF.
  
 
 0.704
AHC15915.1
Hypothetical protein.
       0.596
AHC14020.1
Alkanesulfonates ABC transporter ATP-binding protein.
  
     0.558
AHC15919.1
Hypothetical protein.
       0.545
AHC15921.1
Hydroxymethylpyrimidine ABC transporter, ATPase component.
 
     0.525
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  
 0.524
AHC13796.1
Hypothetical protein.
 
 0.485
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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