STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15948.1Chitinase. (507 aa)    
Predicted Functional Partners:
AHC16030.1
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
    
 
 0.610
AHC13472.1
Outer membrane efflux protein.
    
 
 0.609
AHC14040.1
ATPase component of energizing module of ECF transporter.
   
    0.491
AHC15052.1
ATPase component of general energizing module of ECF transporter.
   
    0.491
AHC15949.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.476
AHC15681.1
Hypothetical protein.
   
    0.467
AHC13580.1
Alcohol dehydrogenase.
   
    0.433
AHC13794.1
Alcohol dehydrogenase/ Acetaldehyde dehydrogenase.
   
    0.433
AHC13886.1
Alcohol dehydrogenase.
   
    0.433
AHC13973.1
Alcohol dehydrogenase/ Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
    0.433
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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