STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC15968.1Flavohemoprotein, putative nitric oxide dioxygenase. (221 aa)    
Predicted Functional Partners:
AHC15755.1
Ferredoxin--NADP(+) reductase.
  
  
 
0.923
AHC14284.1
Ferredoxin, 2Fe-2S.
  
 
 0.912
AHC16350.1
Oxidoreductase, NAD-binding protein.
    
 0.907
AHC13600.1
Hypothetical protein.
  
     0.723
AHC13934.1
Benzoate 1,2-dioxygenase, ferredoxin reductase component.
  
     0.694
AHC14893.1
Putative oxidoreductase FAD/NAD(P)-binding component.
  
     0.636
AHC15969.1
tRNA-i(6)A37 methylthiotransferase.
 
     0.624
AHC15970.1
MiaB family protein, possibly involved in tRNA or rRNA modification.
 
     0.621
AHC15551.1
Na(+)-translocating NADH-quinone reductase subunit F.
  
     0.594
AHC15972.1
Hypothetical protein.
     
 0.567
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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