Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC15993.1Putative cysteine protease. (394 aa)    
Predicted Functional Partners:
AHC15994.1
Serine/threonine protein kinase related protein.
     0.937
AHC15990.1
MoxR-like ATPase.
 
  
 0.860
AHC15992.1
Hypothetical protein.
      0.813
AHC15991.1
Hypothetical protein.
  
  
 0.734
AHC13466.1
Hypothetical protein.
 
  
 0.715
AHC15995.1
Hypothetical protein.
 
     0.582
AHC14136.1
Hypothetical protein.
 
  
 0.549
AHC14137.1
Methanol dehydrogenase regulatory protein.
 
  
 0.549
AHC13467.1
Putative MoxR-like ATPase.
 
  
 0.527
AHC15498.1
Hypothetical protein.
 
   
 0.520
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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