Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC15996.1Cell surface protein. (453 aa)    
Predicted Functional Partners:
AHC15995.1
Hypothetical protein.
       0.752
AHC15993.1
Putative cysteine protease.
  
    0.518
AHC15994.1
Serine/threonine protein kinase related protein.
       0.510
AHC15991.1
Hypothetical protein.
  
  
 0.496
AHC13502.1
Carboxyl-terminal protease; Belongs to the peptidase S41A family.
  
 
 0.483
AHC13628.1
Hypothetical protein.
  
 
 0.483
AHC15533.1
Amylopullulanase.
  
 
 0.483
AHC15990.1
MoxR-like ATPase.
     
 0.459
AHC15750.1
Hypothetical protein.
  
  
 0.444
AHC16382.1
Hypothetical protein.
  
  
 0.444
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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