Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC16076.1Hydroxymethylpyrimidine ABC transporter, substrate-binding component. (341 aa)    
Predicted Functional Partners:
AHC16075.1
Hydroxymethylpyrimidine ABC transporter, ATPase component.
 
 
 0.983
AHC16077.1
Hydroxymethylpyrimidine ABC transporter, transmembrane component.
 
 0.983
AHC15921.1
Hydroxymethylpyrimidine ABC transporter, ATPase component.
  
 
 0.974
AHC16078.1
Hypothetical protein.
 
    0.898
AHC16352.1
Taurine transport system permease protein TauC.
 
 
 0.852
AHC14019.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 
 0.757
AHC14020.1
Alkanesulfonates ABC transporter ATP-binding protein.
  
 
 0.717
AHC16353.1
Taurine transport ATP-binding protein TauB.
  
 
 0.717
AHC14709.1
Nitrogen regulatory protein P-II.
   
 
 0.637
AHC16074.1
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
       0.594
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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