Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AHC16082.1Foldase protein PrsA precursor. (103 aa)    
Predicted Functional Partners:
AHC13572.1
Peptidyl-prolyl cis-trans isomerase.
  
 0.858
AHC15197.1
Outer membrane protein assembly factor YaeT precursor.
  
 
 0.640
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
 
 0.578
AHC16081.1
Hypothetical protein.
       0.545
AHC15117.1
Hypothetical protein.
   
 
 0.541
AHC15419.1
Hypothetical protein.
   
 
 0.536
AHC15994.1
Serine/threonine protein kinase related protein.
   
 
 0.536
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
   
 
 0.470
AHC15237.1
Hypothetical protein.
  
     0.454
AHC16080.1
NAD-dependent protein deacetylase of SIR2 family.
       0.433
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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