STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC16089.1Signal transduction histidine kinase. (667 aa)    
Predicted Functional Partners:
AHC15332.1
Hypothetical protein.
 
 
0.896
AHC16050.1
Hypothetical protein.
 
 0.876
AHC15617.1
Response regulatory protein.
 
 
 0.863
AHC15333.1
Hypothetical protein.
 
 
 0.842
AHC16393.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 
 0.835
AHC14706.1
Hypothetical protein.
 
 
0.819
AHC14775.1
Two-component response regulator SA14-24.
 
 0.819
AHC13900.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 
 0.816
AHC14333.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 
 0.808
AHC16037.1
Response regulator.
 
 
 0.804
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.