Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC16108.1ABC transporter, permease protein. (295 aa)    
Predicted Functional Partners:
AHC16109.1
Binding-protein-dependent transport systems inner membrane component precursor.
 
 0.976
AHC16107.1
Multiple sugar ABC transporter, substrate-binding protein.
 
 
 0.951
AHC15842.1
Maltose/maltodextrin ABC transporter, permease protein MalG.
 
 0.944
AHC13653.1
Multiple sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.931
AHC13961.1
ABC-type sugar transport system, permease component.
 
 0.903
AHC15555.1
Maltose/maltodextrin ABC transporter, permease protein MalG.
 
 0.893
AHC16300.1
Alpha-glucoside transport system permease protein AglG.
 
 0.893
AHC16430.1
Sugar ABC transporter (permease).
 
 
 0.886
AHC16733.1
Inner membrane ABC transporter permease protein YcjP.
 
 0.886
AHC15872.1
Putative chitobiose ABC transport system, permease protein 2.
 
 0.881
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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