STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC16151.1Alpha-amylase. (475 aa)    
Predicted Functional Partners:
AHC16292.1
Trehalose synthase.
 
 
 0.973
AHC13469.1
4-alpha-glucanotransferase (amylomaltase).
 
 
 0.957
AHC13554.1
Maltodextrin glucosidase.
 
 
0.948
AHC13830.1
Glycogen debranching enzyme; Belongs to the glycosyl hydrolase 13 family.
 
 0.948
AHC15468.1
Neopullulanase.
 
 
0.948
AHC15706.1
Glucan 1,6-alpha-glucosidase.
 
 
0.946
AHC16049.1
Maltodextrin glucosidase.
 
 
0.946
AHC13618.1
4-alpha-glucanotransferase (amylomaltase).
 
 
 0.945
AHC16557.1
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.919
AHC16079.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
    
 0.911
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.