Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC16154.1Pyruvate carboxyl transferase subunit B. (630 aa)    
Predicted Functional Partners:
AHC16153.1
Oxaloacetate decarboxylase beta chain.
 
 
 0.998
AHC15541.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 0.976
AHC16155.1
Hypothetical protein.
    
  0.976
AHC16279.1
Pyruvate-flavodoxin oxidoreductase.
  
 0.958
pdhA
Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 
 0.955
AHC16146.1
2-oxoglutarate oxidoreductase, alpha subunit.
  
 0.955
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
  
 
 0.947
AHC15962.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.946
AHC15470.1
Citrate synthase (si); Belongs to the citrate synthase family.
  
 
 0.945
AHC16218.1
Citrate synthase (si); Belongs to the citrate synthase family.
  
 
 0.945
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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