Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC16187.1Hypothetical protein. (291 aa)    
Predicted Functional Partners:
AHC16188.1
MoxR-like ATPase in aerotolerance operon.
  
 0.970
AHC16184.1
BatB.
 
  
 0.962
AHC16185.1
BatA (aerotolerance operon).
 
  
 0.962
AHC16183.1
Putative cytosolic protein.
 
  
 0.925
AHC16186.1
Hypothetical protein.
     
 0.876
AHC16181.1
Hypothetical protein.
  
  
 0.793
AHC16180.1
Smr domain protein.
       0.676
AHC13467.1
Putative MoxR-like ATPase.
  
 0.503
AHC14137.1
Methanol dehydrogenase regulatory protein.
  
 0.481
AHC15990.1
MoxR-like ATPase.
 
  
 0.443
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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