Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AHC16276.1Hypothetical protein. (824 aa)    
Predicted Functional Partners:
AHC16278.1
Oligopeptide transport ATP-binding protein OppF.
 
 
 0.982
AHC16277.1
Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
 
 
 0.978
AHC16275.1
Oligopeptide transport system permease protein OppB.
 
 
 0.958
AHC16400.1
Oligopeptide transport system permease protein OppB.
 
 
 0.950
AHC15831.1
Dipeptide transport system permease protein DppB.
 
 
 0.948
AHC14129.1
Oligopeptide transport system permease protein OppB.
 
 
 0.947
AHC14484.1
(GlcNAc)2 ABC transporter, permease component 1.
 
 
 0.947
AHC15828.1
Dipeptide-binding ABC transporter, periplasmic substrate-binding component.
 
 
 0.939
AHC15829.1
ABC transporter ATP-binding protein.
 
 
 0.931
AHC16397.1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 
 0.918
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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