Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AHC16300.1Alpha-glucoside transport system permease protein AglG. (318 aa)    
Predicted Functional Partners:
AHC16302.1
Alpha-glucosides-binding periplasmic protein AglE precursor.
 
 0.995
AHC16301.1
ABC alpha-glucoside transporter, inner membrane subunit AglF.
 
 0.994
AHC13653.1
Multiple sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.968
AHC16108.1
ABC transporter, permease protein.
 
 0.893
AHC13960.1
Sugar ABC transporter, permease protein.
 
 0.844
AHC16107.1
Multiple sugar ABC transporter, substrate-binding protein.
 
 
 0.815
AHC16431.1
N-Acetyl-D-glucosamine ABC transport system, permease protein.
 
 
 0.815
AHC14182.1
Sugar ABC transporter, permease protein.
 
 0.805
AHC16732.1
Inner membrane ABC transporter permease protein YcjO.
 
 0.801
AHC15873.1
Putative alpha-xyloside ABC transporter, permease component.
 
 0.798
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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