STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC16354.1Hypothetical protein. (350 aa)    
Predicted Functional Partners:
AHC16352.1
Taurine transport system permease protein TauC.
 
  
 0.944
AHC16353.1
Taurine transport ATP-binding protein TauB.
 
  
 0.907
AHC15921.1
Hydroxymethylpyrimidine ABC transporter, ATPase component.
  
  
 0.863
AHC16077.1
Hydroxymethylpyrimidine ABC transporter, transmembrane component.
 
  
 0.610
AHC16808.1
NADH dehydrogenase.
 
   
 0.606
AHC14019.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.601
AHC16075.1
Hydroxymethylpyrimidine ABC transporter, ATPase component.
 
  
 0.600
AHC14737.1
Pheromone cAD1 precursor lipoprotein Cad.
  
     0.561
AHC14020.1
Alkanesulfonates ABC transporter ATP-binding protein.
  
  
 0.544
AHC16355.1
Hypothetical protein.
       0.543
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.