STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC16454.1Hypothetical protein. (2191 aa)    
Predicted Functional Partners:
AHC16453.1
Hypothetical protein.
 
    
0.787
AHC16475.1
Cell division protein FtsX.
  
     0.769
AHC15498.1
Hypothetical protein.
 
     0.755
AHC16573.1
Hypothetical protein.
 
 
 0.734
AHC16473.1
Hypothetical protein.
  
   0.701
AHC14161.1
Hypothetical protein.
 
   
 0.694
AHC13698.1
TPR domain protein, putative component of TonB system.
 
  
 0.682
AHC15145.1
Hypothetical protein.
 
 
 
 0.673
AHC15718.1
Hypothetical protein.
  
     0.666
AHC13702.1
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.650
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.