STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC16487.1N-Acetylneuraminate cytidylyltransferase. (229 aa)    
Predicted Functional Partners:
AHC16489.1
UDP-N-acetylglucosamine 2-epimerase.
  
 0.987
AHC16488.1
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase.
  
 0.972
AHC15578.1
N-acetylneuraminate synthase.
  
 0.921
AHC16485.1
Hypothetical protein.
 
  
 0.885
AHC16486.1
Polysaccharide biosynthesis protein.
 
   
 0.831
AHC16484.1
Hypothetical protein.
  
  
 0.730
AHC16491.1
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.718
AHC16490.1
4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase.
 
     0.706
hisF
Imidazole glycerol phosphate synthase cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
      0.693
AHC16483.1
Teichuronic acid biosynthesis protein TuaE, putative secreted polysaccharide polymerase.
  
  
 0.665
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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