STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC16498.1Polysaccharide export protein. (403 aa)    
Predicted Functional Partners:
AHC16497.1
Hypothetical protein.
 
  
 0.982
AHC15628.1
Cytosolic Fe-S cluster assembling factor NBP35; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.810
AHC16536.1
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.766
AHC14467.1
UDP-N-acetylglucosamine 4,6-dehydratase.
  
  
 0.739
AHC16492.1
UDP-N-acetylglucosamine 4,6-dehydratase.
  
  
 0.739
AHC16496.1
Response regulator LiaR.
       0.732
AHC16499.1
Hypothetical protein.
       0.723
AHC14593.1
Hypothetical protein.
    
 
 0.655
AHC15334.1
Phosphoglucomutase (femD).
 
   
 0.635
AHC16483.1
Teichuronic acid biosynthesis protein TuaE, putative secreted polysaccharide polymerase.
  
  
 0.631
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.