STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHC16544.1Hypothetical protein. (562 aa)    
Predicted Functional Partners:
AHC16543.1
Hypothetical protein.
     
 0.799
AHC16542.1
Peptidase T.
  
  
 0.781
AHC15530.1
Hypothetical protein; Belongs to the glycosyl hydrolase 13 family.
   
 0.594
AHC16151.1
Alpha-amylase.
   
 0.594
AHC16298.1
Hypothetical protein.
   
 0.594
AHC16786.1
1,4-alpha-glucan branching enzyme.
   
 0.594
AHC16545.1
Putative hydrolase.
 
 
 0.572
AHC16486.1
Polysaccharide biosynthesis protein.
  
  
 0.476
AHC16541.1
Putative sucrose phosphorylase.
   
 
 0.473
AHC16557.1
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.471
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.