Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AHC16549.1Serine-protein kinase RsbW. (177 aa)    
Predicted Functional Partners:
AHC16548.1
Anti-sigma F factor antagonist, anti sigma b factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.963
AHC15332.1
Hypothetical protein.
  
  
 0.868
AHC14605.1
RNA polymerase sigma factor for flagellar operon; Belongs to the sigma-70 factor family.
  
 
 0.862
AHC16602.1
Anti-sigma F factor antagonist, Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.847
AHC13508.1
Anti-sigma F factor antagonist, Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.846
AHC15195.1
Anti-sigma-factor antagonist.
  
 
 0.846
AHC16547.1
Serine phosphatase.
  
 
 0.836
AHC16050.1
Hypothetical protein.
  
  
 0.820
AHC15486.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
  
 
 0.770
AHC14575.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.769
Your Current Organism:
Salinispira pacifica
NCBI taxonomy Id: 1307761
Other names: DSM 27196, JCM 18663, S. pacifica, Salinispira pacifica Ben Hania et al. 2015, Spirochaeta sp. L21-RPul-D2, strain L21-RPul-D2
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